ING3 is required for ATM signaling and DNA repair in response to DNA double strand breaks

Cell Death Differ. 2019 Nov;26(11):2344-2357. doi: 10.1038/s41418-019-0305-x. Epub 2019 Feb 25.

Abstract

Inhibitor of Growth 3 (ING3) is a candidate tumor suppressor gene whose expression is lost in tumors such as hepatocellular carcinoma, head and neck squamous cell carcinoma and melanoma. In the present study, we show that ING3-depleted human cells and yeast cells deleted for its ortholog YNG2 are sensitive to DNA damage suggesting a conserved role in response to such stress. In human cells, ING3 is recruited to DNA double strand breaks and is required for ATM activation. Remarkably, in response to doxorubicin, ATM activation is dependent on ING3 but not on TIP60, whose recruitment to DNA breaks also depends on ING3. These events lead to ATM-mediated phosphorylation of NBS1 and the subsequent recruitment of RNF8, RNF168, 53BP1, and BRCA1, which are major mediators of the DNA damage response. Accordingly, upon genotoxic stress, DNA repair by non-homologous end joining (NHEJ) or homologous recombination (HR) were impaired in absence of ING3. Finally, immunoglobulin class switch recombination (CSR), a physiological mechanism requiring NHEJ repair, was impaired in the absence of ING3. Since deregulation of DNA double strand break repair is associated with genomic instability, we propose a novel function of ING3 as a caretaker tumor suppressor involved in the DNA damage signaling and repair.

MeSH terms

  • A549 Cells
  • Acetyltransferases / genetics
  • Animals
  • Antibiotics, Antineoplastic / pharmacology
  • Ataxia Telangiectasia Mutated Proteins / metabolism*
  • BRCA1 Protein / metabolism
  • Cell Line, Tumor
  • DNA / genetics
  • DNA / metabolism
  • DNA Breaks, Double-Stranded
  • DNA End-Joining Repair / genetics*
  • DNA-Binding Proteins / metabolism
  • Doxorubicin / pharmacology
  • Enzyme Activation / genetics
  • Genomic Instability / genetics*
  • Homeodomain Proteins / genetics
  • Homeodomain Proteins / metabolism*
  • Humans
  • Immunoglobulin Class Switching / genetics
  • Lysine Acetyltransferase 5 / genetics
  • Mice
  • RNA Interference
  • RNA, Small Interfering / genetics
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae Proteins / genetics
  • Signal Transduction / genetics
  • Tumor Suppressor Proteins / genetics*
  • Tumor Suppressor Proteins / metabolism
  • Tumor Suppressor p53-Binding Protein 1 / metabolism
  • Ubiquitin-Protein Ligases / metabolism

Substances

  • Antibiotics, Antineoplastic
  • BRCA1 Protein
  • BRCA1 protein, human
  • DNA-Binding Proteins
  • Homeodomain Proteins
  • ING3 protein, human
  • RNA, Small Interfering
  • RNF8 protein, human
  • Saccharomyces cerevisiae Proteins
  • TP53BP1 protein, human
  • Tumor Suppressor Proteins
  • Tumor Suppressor p53-Binding Protein 1
  • Doxorubicin
  • DNA
  • Acetyltransferases
  • Yng2 protein, S cerevisiae
  • KAT5 protein, human
  • Lysine Acetyltransferase 5
  • RNF168 protein, human
  • Ubiquitin-Protein Ligases
  • ATM protein, human
  • Ataxia Telangiectasia Mutated Proteins