Incorporation of non-standard amino acids into proteins: challenges, recent achievements, and emerging applications

Appl Microbiol Biotechnol. 2019 Apr;103(7):2947-2958. doi: 10.1007/s00253-019-09690-6. Epub 2019 Feb 21.

Abstract

The natural genetic code only allows for 20 standard amino acids in protein translation, but genetic code reprogramming enables the incorporation of non-standard amino acids (NSAAs). Proteins containing NSAAs provide enhanced or novel properties and open diverse applications. With increased attention to the recent advancements in synthetic biology, various improved and novel methods have been developed to incorporate single and multiple distinct NSAAs into proteins. However, various challenges remain in regard to NSAA incorporation, such as low yield and misincorporation. In this review, we summarize the recent efforts to improve NSAA incorporation by utilizing orthogonal translational system optimization, cell-free protein synthesis, genomically recoded organisms, artificial codon boxes, quadruplet codons, and orthogonal ribosomes, before closing with a discussion of the emerging applications of NSAA incorporation.

Keywords: Genetic code expansion; Non-standard amino acids; Orthogonal translational system; Synthetic biology.

Publication types

  • Review

MeSH terms

  • Amino Acids / chemistry*
  • Amino Acids / genetics
  • Amino Acids, Diamino / chemistry
  • Amino Acids, Diamino / genetics
  • Codon / genetics
  • Escherichia coli / genetics
  • Genetic Code*
  • Protein Biosynthesis*
  • Protein Processing, Post-Translational
  • Proteins / chemistry*
  • Proteomics
  • Ribosomes / genetics
  • Synthetic Biology*

Substances

  • Amino Acids
  • Amino Acids, Diamino
  • Codon
  • Proteins