Impact of Pyridyl Moieties on the Inhibitory Properties of Prominent Acyclic Metal Chelators Against Metallo-β-Lactamase-Producing Enterobacteriaceae: Investigating the Molecular Basis of Acyclic Metal Chelators' Activity

Microb Drug Resist. 2019 Apr;25(3):439-449. doi: 10.1089/mdr.2018.0272. Epub 2019 Feb 11.

Abstract

Carbapenem-resistant Enterobacteriaceae (CREs)-mediated infections remain a huge public health concern. CREs produce enzymes such as metallo-β-lactamases (MBLs), which inactivate β-lactam antibiotics. Hence, developing efficient molecules capable of inhibiting these enzymes remains a way forward to overcoming this phenomenon. In this study, we demonstrate that pyridyl moieties favor the inhibitory activity of cyclic metal-chelating agents through in vitro screening, molecular modeling, and docking assays. Di-(2-picolyl) amine and tris-(2-picolyl) amine exhibited great efficacy against different types of MBLs and strong binding affinity for NDM-1, whereas 2-picolyl amine did not show activity at a concentration of 64 mg/L in combination with meropenem; it further showed the lowest binding affinity from computational molecular analysis, commensurating with the in vitro screening assays. The findings revealed that the pyridyl group plays a vital role in the inhibitory activity of the tested molecules against CREs and should be exploited as potential MBL inhibitors.

Keywords: Enterobacteriaceae; binding affinity; metal chelator; metallo-β-lactamase inhibitors; pyridyls.

MeSH terms

  • Anti-Bacterial Agents / pharmacology*
  • Bacterial Proteins / metabolism
  • Chelating Agents / pharmacology*
  • Enterobacteriaceae / drug effects*
  • Enterobacteriaceae / metabolism
  • Enterobacteriaceae Infections / drug therapy*
  • Humans
  • Meropenem / pharmacology
  • Metals / metabolism
  • Microbial Sensitivity Tests / methods
  • Models, Molecular
  • beta-Lactamases / metabolism*

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Chelating Agents
  • Metals
  • beta-Lactamases
  • Meropenem