Integrated Phosphoproteome and Transcriptome Analysis Reveals Chlamydia-Induced Epithelial-to-Mesenchymal Transition in Host Cells

Cell Rep. 2019 Jan 29;26(5):1286-1302.e8. doi: 10.1016/j.celrep.2019.01.006.

Abstract

Chlamydia trachomatis (Ctr) causes a range of infectious diseases and is epidemiologically associated with cervical and ovarian cancers. To obtain a panoramic view of Ctr-induced signaling, we performed global phosphoproteomic and transcriptomic analyses. We identified numerous Ctr phosphoproteins and Ctr-regulated host phosphoproteins. Bioinformatics analysis revealed that these proteins were predominantly related to transcription regulation, cellular growth, proliferation, and cytoskeleton organization. In silico kinase substrate motif analysis revealed that MAPK and CDK were the most overrepresented upstream kinases for upregulated phosphosites. Several of the regulated host phosphoproteins were transcription factors, including ETS1 and ERF, that are downstream targets of MAPK. Functional analysis of phosphoproteome and transcriptome data confirmed their involvement in epithelial-to-mesenchymal transition (EMT), a phenotype that was validated in infected cells, along with the essential role of ERK1/2, ETS1, and ERF for Ctr replication. Our data reveal the extent of Ctr-induced signaling and provide insights into its pro-carcinogenic potential.

Keywords: Chlamydia trachomatis; cervical cancer; human papillomavirus; human primary cells; ovarian cancer; signaling; transcription factors.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Active Transport, Cell Nucleus
  • Animals
  • Cell Adhesion
  • Cell Line
  • Cell Movement
  • Chlamydia trachomatis / physiology*
  • Epithelial-Mesenchymal Transition* / genetics
  • Extracellular Signal-Regulated MAP Kinases / metabolism
  • Gene Expression Profiling*
  • Host-Pathogen Interactions*
  • Humans
  • Mice
  • Phenotype
  • Phosphoproteins / metabolism*
  • Phosphorylation
  • Protein Kinases / metabolism
  • Proteome / metabolism*
  • Reproducibility of Results
  • Signal Transduction
  • Transcription Factors / metabolism
  • Transcription, Genetic
  • Transcriptome / genetics

Substances

  • Phosphoproteins
  • Proteome
  • Transcription Factors
  • Protein Kinases
  • Extracellular Signal-Regulated MAP Kinases