Rapid identification of common medicinal snakes and their adulterants using the Bar-HRM analysis method

Mitochondrial DNA A DNA Mapp Seq Anal. 2019 Mar;30(2):367-374. doi: 10.1080/24701394.2018.1532417. Epub 2019 Jan 27.

Abstract

Effective identification methods for snake species are lacking, exacerbating the extermination of medicinal and commercially valuable snake species. Hence, it is imperative to find fast and reliable methods to distinguish snake samples available on the market. Seventy-three samples from four families belonging to 13 genera were collected in China and found to contain common medicinal snakes and their adulterants. Cytochrome oxidase I (COI) was utilized as a DNA barcode to analyse these common snakes, and a DNA mini-barcode was employed for fast detection. Then, the DNA mini-barcode assays were coupled with a high-resolution melting (HRM) analysis (Bar-HRM) to realize the rapid discrimination of these snake species. The results showed the power of DNA barcoding with COI, which was capable of distinguishing all collected snake samples, and the combined Bar-HRM method can successfully identify the adulterants and different snake species. In particular, Bar-HRM revealed Bungarus fasciatus adulterants in B. multicinctus at concentrations as low as 1.6%. Moreover, the results of the study confirmed the effectiveness of the technique in terms of the rapid identification of snakes, which has great potential for ensuring the safety of commercially valuable snake species.

Keywords: Bar-HRM; COI; Snakes; mini-barcodes; rapid identification.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • DNA Barcoding, Taxonomic / methods*
  • Electron Transport Complex IV / genetics
  • Snakes / classification
  • Snakes / genetics*

Substances

  • Electron Transport Complex IV