An ancient germ cell-specific RNA-binding protein protects the germline from cryptic splice site poisoning

Elife. 2019 Jan 24:8:e39304. doi: 10.7554/eLife.39304.

Abstract

Male germ cells of all placental mammals express an ancient nuclear RNA binding protein of unknown function called RBMXL2. Here we find that deletion of the retrogene encoding RBMXL2 blocks spermatogenesis. Transcriptome analyses of age-matched deletion mice show that RBMXL2 controls splicing patterns during meiosis. In particular, RBMXL2 represses the selection of aberrant splice sites and the insertion of cryptic and premature terminal exons. Our data suggest a Rbmxl2 retrogene has been conserved across mammals as part of a splicing control mechanism that is fundamentally important to germ cell biology. We propose that this mechanism is essential to meiosis because it buffers the high ambient concentrations of splicing activators, thereby preventing poisoning of key transcripts and disruption to gene expression by aberrant splice site selection.

Keywords: RNA; alternative splicing; chromosomes; gene expression; meiosis; mouse; retrogene; spermatogenesis.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Exons / genetics
  • Fertility
  • Gene Expression Regulation, Developmental
  • Germ Cells / metabolism*
  • Male
  • Meiosis / genetics
  • Metaphase / genetics
  • Mice, Inbred C57BL
  • Models, Animal
  • Organ Specificity
  • RNA Splice Sites / genetics*
  • RNA Splicing / genetics
  • RNA-Binding Proteins / metabolism*
  • Testis / metabolism

Substances

  • RNA Splice Sites
  • RNA-Binding Proteins