Progress and challenges in aminoacyl-tRNA synthetase-based therapeutics

J Biol Chem. 2019 Apr 5;294(14):5365-5385. doi: 10.1074/jbc.REV118.002956. Epub 2019 Jan 22.

Abstract

Aminoacyl-tRNA synthetases (ARSs) are universal enzymes that catalyze the attachment of amino acids to the 3' ends of their cognate tRNAs. The resulting aminoacylated tRNAs are escorted to the ribosome where they enter protein synthesis. By specifically matching amino acids to defined anticodon sequences in tRNAs, ARSs are essential to the physical interpretation of the genetic code. In addition to their canonical role in protein synthesis, ARSs are also involved in RNA splicing, transcriptional regulation, translation, and other aspects of cellular homeostasis. Likewise, aminoacylated tRNAs serve as amino acid donors for biosynthetic processes distinct from protein synthesis, including lipid modification and antibiotic biosynthesis. Thanks to the wealth of details on ARS structures and functions and the growing appreciation of their additional roles regulating cellular homeostasis, opportunities for the development of clinically useful ARS inhibitors are emerging to manage microbial and parasite infections. Exploitation of these opportunities has been stimulated by the discovery of new inhibitor frameworks, the use of semi-synthetic approaches combining chemistry and genome engineering, and more powerful techniques for identifying leads from the screening of large chemical libraries. Here, we review the inhibition of ARSs by small molecules, including the various families of natural products, as well as inhibitors developed by either rational design or high-throughput screening as antibiotics and anti-parasitic therapeutics.

Keywords: Trojan horse approach; aminoacyl sulfamate; aminoacyl tRNA synthetase; antibiotic action; inhibitor; malaria; mupirocin; peptidyl transferase; transfer RNA (tRNA); translation.

Publication types

  • Research Support, N.I.H., Extramural
  • Review

MeSH terms

  • Amino Acyl-tRNA Synthetases* / antagonists & inhibitors
  • Amino Acyl-tRNA Synthetases* / genetics
  • Amino Acyl-tRNA Synthetases* / metabolism
  • Animals
  • Anti-Bacterial Agents* / chemistry
  • Anti-Bacterial Agents* / therapeutic use
  • Antiparasitic Agents* / chemistry
  • Antiparasitic Agents* / therapeutic use
  • Enzyme Inhibitors* / chemistry
  • Enzyme Inhibitors* / therapeutic use
  • Humans
  • Infections* / drug therapy
  • Infections* / enzymology
  • Infections* / genetics
  • Infections* / pathology
  • Parasitic Diseases* / drug therapy
  • Parasitic Diseases* / enzymology
  • Parasitic Diseases* / genetics
  • RNA Splicing / drug effects
  • RNA, Transfer / genetics
  • RNA, Transfer / metabolism

Substances

  • Anti-Bacterial Agents
  • Antiparasitic Agents
  • Enzyme Inhibitors
  • RNA, Transfer
  • Amino Acyl-tRNA Synthetases

Associated data

  • PDB/4YDQ
  • PDB/4HVC
  • PDB/4P3N
  • PDB/1JZS