Acetate Kinase (AcK) is Essential for Microbial Growth and Betel-derived Compounds Potentially Target AcK, PhoP and MDR Proteins in M. tuberculosis, V. cholerae and Pathogenic E. coli: An in silico and in vitro Study

Curr Top Med Chem. 2018;18(31):2731-2740. doi: 10.2174/1568026619666190121105851.

Abstract

Background: Mycobacterium tuberculosis, Vibrio cholerae, and pathogenic Escherichia coli are global concerns for public health. The emergence of multi-drug resistant (MDR) strains of these pathogens is creating additional challenges in controlling infections caused by these deadly bacteria. Recently, we reported that Acetate kinase (AcK) could be a broad-spectrum novel target in several bacteria including these pathogens.

Methods: Here, using in silico and in vitro approaches we show that (i) AcK is an essential protein in pathogenic bacteria; (ii) natural compounds Chlorogenic acid and Pinoresinol from Piper betel and Piperidine derivative compound 6-oxopiperidine-3-carboxylic acid inhibit the growth of pathogenic E. coli and M. tuberculosis by targeting AcK with equal or higher efficacy than the currently used antibiotics; (iii) molecular modeling and docking studies show interactions between inhibitors and AcK that correlate with the experimental results; (iv) these compounds are highly effective even on MDR strains of these pathogens; (v) further, the compounds may also target bacterial two-component system proteins that help bacteria in expressing the genes related to drug resistance and virulence; and (vi) finally, all the tested compounds are predicted to have drug-like properties.

Results and conclusion: Suggesting that, these Piper betel derived compounds may be further tested for developing a novel class of broad-spectrum drugs against various common and MDR pathogens.

Keywords: ACK; Infectious disease; Multi-drug resistant; Natural compounds; Piper betel; Tuberculosis..

MeSH terms

  • Acetate Kinase / antagonists & inhibitors*
  • Acetate Kinase / genetics
  • Acetate Kinase / metabolism
  • Anti-Bacterial Agents / chemistry
  • Anti-Bacterial Agents / isolation & purification
  • Anti-Bacterial Agents / pharmacology*
  • Bacterial Proteins / antagonists & inhibitors
  • Bacterial Proteins / metabolism
  • Carboxylic Acids / chemistry
  • Carboxylic Acids / isolation & purification
  • Carboxylic Acids / pharmacology
  • Chlorogenic Acid / chemistry
  • Chlorogenic Acid / isolation & purification
  • Chlorogenic Acid / pharmacology
  • Dose-Response Relationship, Drug
  • Drug Resistance, Multiple / drug effects
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / isolation & purification
  • Enzyme Inhibitors / pharmacology*
  • Escherichia coli / drug effects*
  • Escherichia coli / growth & development
  • Escherichia coli / metabolism
  • Furans / chemistry
  • Furans / isolation & purification
  • Furans / pharmacology
  • Lignans / chemistry
  • Lignans / isolation & purification
  • Lignans / pharmacology
  • Microbial Sensitivity Tests
  • Molecular Docking Simulation*
  • Molecular Structure
  • Mycobacterium tuberculosis / drug effects*
  • Mycobacterium tuberculosis / growth & development
  • Mycobacterium tuberculosis / metabolism
  • Piper betle / chemistry
  • Piperidines / chemistry
  • Piperidines / isolation & purification
  • Piperidines / pharmacology
  • Structure-Activity Relationship

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Carboxylic Acids
  • Enzyme Inhibitors
  • Furans
  • Lignans
  • Piperidines
  • PhoP protein, Bacteria
  • Chlorogenic Acid
  • piperidine
  • Acetate Kinase
  • pinoresinol