Molecular docking of anti-inflammatory drug diclofenac with metabolic targets: Potential applications in cancer therapeutics

J Theor Biol. 2019 Mar 21:465:117-125. doi: 10.1016/j.jtbi.2019.01.020. Epub 2019 Jan 14.

Abstract

Diclofenac is a potent NSAID of clinical choice, which is widely used for containing inflammation. Moreover, recent experimental evidences overwhelmingly substantiate its antineoplastic potential. However, the precise molecular mechanisms of diclofenac's anticancer activity remain poorly understood. Neoplastic cells display reprogrammed metabolic features, which are manifested and regulated by a complex networking of molecular pathways. However, the effect of diclofenac on tumor cell metabolism are not yet clearly deciphered. Hence, the present investigation was carried out to identify and characterize key diclofenac targets of tumor metabolism, cell survival and chemoresistance. The interactions of diclofenac with such targets was analysed by PatchDock and YASARA (Yet Another Scientific Artificial Reality Application). The docking ability of diclofenac with its targets was based on analysis of dissociation constant (Kd), geometric shape complementarity score (GSC score), approximate interface area (AI area) and binding energy. The findings of this investigation reveal that diclofenac is capable of interacting with all of the selected molecular targets. Prominent interactions were observed with GLUT1, MCT4, LDH A, COX1, COX2, BCRP/ABCG2, HDM2/MDM2 and MRP1 compared to other targets. Interactions were of noncovalent nature involving ionic, hydrophobic interactions, Van der Waals forces and H-bonds, which varied depending on targets. This study for the first time, characterizes the nature of molecular interactions of diclofenac with selected targets involved in cancer cell metabolism, pH homeostasis, chemosensitivity, cell signalling and inflammation. Hence, these findings will be highly beneficial in optimizing the utility of diclofenac in development of novel cancer therapeutics.

Keywords: Cancer metabolism; Cancer therapeutics; Diclofenac; Inflammation; Molecular docking.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • ATP Binding Cassette Transporter, Subfamily G, Member 2 / chemistry
  • ATP Binding Cassette Transporter, Subfamily G, Member 2 / metabolism
  • Anti-Inflammatory Agents, Non-Steroidal / chemistry
  • Anti-Inflammatory Agents, Non-Steroidal / metabolism
  • Anti-Inflammatory Agents, Non-Steroidal / pharmacology
  • Cyclooxygenase 1 / chemistry
  • Cyclooxygenase 1 / metabolism
  • Diclofenac / chemistry
  • Diclofenac / metabolism*
  • Diclofenac / pharmacology
  • Glucose Transporter Type 1 / chemistry
  • Glucose Transporter Type 1 / metabolism
  • Humans
  • Kinetics
  • Molecular Docking Simulation*
  • Molecular Structure
  • Monocarboxylic Acid Transporters / chemistry
  • Monocarboxylic Acid Transporters / metabolism
  • Muscle Proteins / chemistry
  • Muscle Proteins / metabolism
  • Neoplasm Proteins / chemistry
  • Neoplasm Proteins / metabolism*
  • Neoplasms / drug therapy
  • Neoplasms / metabolism*
  • Protein Binding
  • Protein Conformation
  • Proto-Oncogene Proteins c-mdm2 / chemistry
  • Proto-Oncogene Proteins c-mdm2 / metabolism
  • Signal Transduction / drug effects

Substances

  • ATP Binding Cassette Transporter, Subfamily G, Member 2
  • Anti-Inflammatory Agents, Non-Steroidal
  • Glucose Transporter Type 1
  • Monocarboxylic Acid Transporters
  • Muscle Proteins
  • Neoplasm Proteins
  • SLC16A4 protein, human
  • Diclofenac
  • Cyclooxygenase 1
  • PTGS1 protein, human
  • Proto-Oncogene Proteins c-mdm2