A diversity-oriented rhodamine library for wide-spectrum bactericidal agents with low inducible resistance against resistant pathogens

Nat Commun. 2019 Jan 16;10(1):258. doi: 10.1038/s41467-018-08241-3.

Abstract

Antimicrobial resistance is a public health emergency and warrants coordinated global efforts. Challenge is that no alternative molecular platform has been identified for discovery of abundant antimicrobial hit compounds. Xanthene libraries have been screened for bioactive compounds. However, the potentially accessible chemistry space of xanthene dyes is limited by the existing xanthene synthesis. Herein we report a mild one-step synthesis, which permits late-stage introduction of a xanthene moiety onto i.e. natural products, pharmaceuticals, and bioactive compounds and construction of a focused library of rhodamine dyes exhibiting facile functional, topographical and stereochemical diversity. In vitro screening yields 37 analogs with mid-to-high bactericidal activity against WHO priority drug-resistant pathogens. These findings suggest that synthetic dye libraries exhibiting high structural diversity is a feasible chemical space combating antibacterial resistance, to complement the natural sources.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Anti-Bacterial Agents / chemical synthesis
  • Anti-Bacterial Agents / pharmacology*
  • Bacteria / drug effects*
  • Bacteria / genetics
  • Bacteria / ultrastructure
  • Biological Products / chemical synthesis
  • Biological Products / pharmacology
  • Combinatorial Chemistry Techniques
  • Drug Development / methods
  • Drug Resistance, Bacterial / drug effects*
  • Drug Resistance, Bacterial / genetics
  • Erythrocytes
  • Feasibility Studies
  • Genome, Bacterial / drug effects
  • Genome, Bacterial / genetics
  • HeLa Cells
  • Hemolysis / drug effects
  • Human Umbilical Vein Endothelial Cells
  • Humans
  • Microbial Sensitivity Tests
  • Microscopy, Electron, Scanning
  • Molecular Structure
  • Rhodamines / chemical synthesis
  • Rhodamines / pharmacology*
  • Sheep
  • Small Molecule Libraries / chemical synthesis
  • Small Molecule Libraries / pharmacology*
  • Whole Genome Sequencing

Substances

  • Anti-Bacterial Agents
  • Biological Products
  • Rhodamines
  • Small Molecule Libraries