Translatomics: The Global View of Translation

Int J Mol Sci. 2019 Jan 8;20(1):212. doi: 10.3390/ijms20010212.

Abstract

In all kingdoms of life, proteins are synthesized by ribosomes in a process referred to as translation. The amplitude of translational regulation exceeds the sum of transcription, mRNA degradation and protein degradation. Therefore, it is essential to investigate translation in a global scale. Like the other "omics"-methods, translatomics investigates the totality of the components in the translation process, including but not limited to translating mRNAs, ribosomes, tRNAs, regulatory RNAs and nascent polypeptide chains. Technical advances in recent years have brought breakthroughs in the investigation of these components at global scale, both for their composition and dynamics. These methods have been applied in a rapidly increasing number of studies to reveal multifaceted aspects of translation control. The process of translation is not restricted to the conversion of mRNA coding sequences into polypeptide chains, it also controls the composition of the proteome in a delicate and responsive way. Therefore, translatomics has extended its unique and innovative power to many fields including proteomics, cancer research, bacterial stress response, biological rhythmicity and plant biology. Rational design in translation can enhance recombinant protein production for thousands of times. This brief review summarizes the main state-of-the-art methods of translatomics, highlights recent discoveries made in this field and introduces applications of translatomics on basic biological and biomedical research.

Keywords: RNC-mRNA; RNC-seq; Ribo-seq; polysome profiling; translation regulation; translatomics.

Publication types

  • Review

MeSH terms

  • Animals
  • Disease
  • Humans
  • Internet
  • Protein Biosynthesis*
  • Proteomics*
  • RNA, Messenger / metabolism
  • Ribosomes / metabolism

Substances

  • RNA, Messenger