miRNA-Mediated Regulation of Synthetic Gene Circuits in the Green Alga Chlamydomonas reinhardtii

ACS Synth Biol. 2019 Feb 15;8(2):358-370. doi: 10.1021/acssynbio.8b00393. Epub 2019 Jan 24.

Abstract

MicroRNAs (miRNAs), small RNA molecules of 20-24 nts, have many features that make them useful tools for gene expression regulation-small size, flexible design, target predictability, and action at a late stage of the gene expression pipeline. In addition, their role in fine-tuning gene expression can be harnessed to increase robustness of synthetic gene networks. In this work, we apply a synthetic biology approach to characterize miRNA-mediated gene expression regulation in the unicellular green alga Chlamydomonas reinhardtii. This characterization is then used to build tools based on miRNAs, such as synthetic miRNAs, miRNA-responsive 3'UTRs, miRNA decoys, and self-regulatory loops. These tools will facilitate the engineering of gene expression for new applications and improved traits in this alga.

Keywords: Chlamydomonas reinhardtii; gene expression; miRNA; synthetic gene circuit.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions / genetics
  • Chlamydomonas reinhardtii / genetics
  • Chlamydomonas reinhardtii / metabolism*
  • Gene Expression Regulation
  • Genes, Synthetic / genetics
  • MicroRNAs / genetics
  • MicroRNAs / metabolism*

Substances

  • 3' Untranslated Regions
  • MicroRNAs