A minimal set of physiomarkers in continuous high frequency data streams predict adult sepsis onset earlier

Int J Med Inform. 2019 Feb:122:55-62. doi: 10.1016/j.ijmedinf.2018.12.002. Epub 2018 Dec 10.

Abstract

Purpose: Sepsis is a life-threatening condition with high mortality rates and expensive treatment costs. To improve short- and long-term outcomes, it is critical to detect at-risk sepsis patients at an early stage.

Methods: A data-set consisting of high-frequency physiological data from 1161 critically ill patients was analyzed. 377 patients had developed sepsis, and had data at least 3 h prior to the onset of sepsis. A random forest classifier was trained to discriminate between sepsis and non-sepsis patients in real-time using a total of 132 features extracted from a moving time-window. The model was trained on 80% of the patients and was tested on the remaining 20% of the patients, for two observational periods of lengths 3 and 6 h prior to onset.

Results: The model that used continuous physiological data alone resulted in sensitivity and F1 score of up to 80% and 67% one hour before sepsis onset. On average, these models were able to predict sepsis 294.19 ± 6.50 min (5 h) before the onset.

Conclusions: The use of machine learning algorithms on continuous streams of physiological data can allow for early identification of at-risk patients in real-time with high accuracy.

Keywords: Artificial intelligence; Critical care; Physiological data; Predictive model; Sepsis.

Publication types

  • Observational Study

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Aged, 80 and over
  • Algorithms*
  • Biomarkers / analysis*
  • Blood Pressure
  • Cardiovascular Diseases / complications*
  • Critical Illness
  • Female
  • Heart Rate
  • Humans
  • Intensive Care Units
  • Machine Learning*
  • Male
  • Middle Aged
  • Models, Cardiovascular*
  • Retrospective Studies
  • Sepsis / diagnosis*
  • Sepsis / etiology
  • Young Adult

Substances

  • Biomarkers