AtNPR4 from Arabidopsis thaliana: expression, purification, crystallization and crystallographic analysis

Acta Crystallogr F Struct Biol Commun. 2019 Jan 1;75(Pt 1):67-72. doi: 10.1107/S2053230X18017235. Epub 2019 Jan 1.

Abstract

Salicylic acid (SA) is an important phytohormone that is involved in the regulation of plant defence, growth and development. A large number of proteins have been shown to have the ability to interact with SA, and NPR4 has been demonstrated to be a receptor of SA that plays significant roles in the innate immune response of plants. In this study, Spodoptera frugiperda (Sf9) cells were used to express full-length AtNPR4 from Arabidopsis thaliana. To facilitate crystallization, T4 lysozyme (T4L) was added to the N-terminus of the AtNPR4 protein. The recombinant T4L-AtNPR4 protein was expressed, purified and crystallized using the sitting-drop and hanging-drop vapour-diffusion methods. The T4L-AtNPR4 crystals have symmetry consistent with space group C2, with unit-cell parameters a = 93.7, b = 85.8, c = 88.2 Å, β = 90° and one molecule per asymmetric unit. The best crystal diffracted to a resolution of 2.75 Å. Structure determination is in progress.

Keywords: Arabidopsis thaliana; crystal diffraction; protein purification; regulatory mechanism; salicylic acid; systemic acquired resistance.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Arabidopsis / chemistry*
  • Arabidopsis / genetics
  • Arabidopsis / immunology
  • Arabidopsis Proteins / chemistry*
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / immunology
  • Bacteriophage T4 / chemistry
  • Bacteriophage T4 / genetics
  • Bacteriophage T4 / metabolism
  • Baculoviridae / genetics
  • Baculoviridae / metabolism
  • Cloning, Molecular
  • Crystallization
  • Crystallography, X-Ray
  • Gene Expression
  • Genetic Vectors / chemistry
  • Genetic Vectors / metabolism
  • Muramidase / chemistry
  • Muramidase / genetics
  • Muramidase / metabolism
  • Plant Immunity / genetics
  • Protein Isoforms / chemistry
  • Protein Isoforms / genetics
  • Protein Isoforms / immunology
  • Recombinant Fusion Proteins / chemistry*
  • Recombinant Fusion Proteins / genetics
  • Recombinant Fusion Proteins / immunology
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Salicylic Acid / chemistry
  • Salicylic Acid / immunology
  • Salicylic Acid / metabolism
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Sf9 Cells
  • Spodoptera
  • Viral Proteins / chemistry
  • Viral Proteins / genetics
  • Viral Proteins / metabolism

Substances

  • Arabidopsis Proteins
  • NPR4 protein, Arabidopsis
  • Protein Isoforms
  • Recombinant Fusion Proteins
  • Recombinant Proteins
  • Viral Proteins
  • Muramidase
  • Salicylic Acid