Targeted discovery and identification of novel nucleoside biomarkers in Apostichopus japonicus viscera using metabonomics

Nucleosides Nucleotides Nucleic Acids. 2019;38(3):203-217. doi: 10.1080/15257770.2018.1514121. Epub 2018 Dec 27.

Abstract

In this study, we investigated the metabonomic profiles of Apostichopus japonicus using an LC-MS-based method in conjunction with multivariate data analysis. Based on the PLS-DA model, 85 differential metabolites (VIP value >1.0) were obtained from viscera and body wall samples. The MS/MS and NMR experiments were used for the qualitative identification of the characteristic peaks. Sphingoid-based nucleoside analogues were the main components in Chinese A. japonicus viscera. Our findings demonstrate that A. japonicus viscera contain a large number of compounds that may have applications as nutraceuticals or pharmaceuticals.

Keywords: viscera; fragmentation pathway; metabonomics; nucleoside analogues; sphingoid.

MeSH terms

  • Animals
  • Biomarkers / analysis*
  • Biomarkers / metabolism
  • Chromatography, High Pressure Liquid / methods
  • Magnetic Resonance Spectroscopy / methods
  • Metabolomics / methods*
  • Multivariate Analysis
  • Nucleosides / analysis*
  • Nucleosides / isolation & purification
  • Nucleosides / metabolism
  • Principal Component Analysis / methods
  • Stichopus / genetics*
  • Tandem Mass Spectrometry / methods
  • Viscera / metabolism*

Substances

  • Biomarkers
  • Nucleosides