Exploring Pairwise Chemical Crosslinking To Study Peptide-Receptor Interactions

Chembiochem. 2019 Mar 1;20(5):683-692. doi: 10.1002/cbic.201800582. Epub 2019 Jan 25.

Abstract

Pairwise crosslinking is a powerful technique to characterize interactions between G protein coupled receptors and their ligands in the live cell. In this work, the "thiol trapping" method, which exploits the proximity-enhanced reaction between haloacetamides and cysteine, is examined to identify intermolecular pairs of vicinal positions. By incorporating cysteine into the corticotropin-releasing factor receptor and either α-chloro- or α-bromoacetamide groups into its ligands, it is shown that thiol trapping provides highly reproducible signals and a low background, and represents a valid alternative to classical "disulfide trapping". The method is advantageous if reducing agents are required during sample analysis. Moreover, it can provide partially distinct spatial constraints, thus giving access to a wider dataset for molecular modeling. Finally, by applying recombinant mini-Gs, GTPγS, and Gαs-depleted HEK293 cells to modulate Gs coupling, it is shown that yields of crosslinking increase in the presence of elevated levels of Gs.

Keywords: crosslinking; molecular modeling; peptide-protein interactions; peptides; sulfur.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cysteine / chemistry
  • Disulfides / chemistry
  • HEK293 Cells
  • Humans
  • Ligands
  • Models, Molecular
  • Peptides / metabolism*
  • Protein Binding
  • Protein Conformation
  • Receptors, Corticotropin-Releasing Hormone / chemistry*

Substances

  • Disulfides
  • Ligands
  • Peptides
  • Receptors, Corticotropin-Releasing Hormone
  • Cysteine