Identification of novel pathogenic ABCA4 variants in a Han Chinese family with Stargardt disease

Biosci Rep. 2019 Jan 15;39(1):BSR20180872. doi: 10.1042/BSR20180872. Print 2019 Jan 31.

Abstract

Stargardt disease (STGD1, OMIM 248200) is a common hereditary juvenile or early adult onset macular degeneration. It ultimately leads to progressive central vision loss. Here, we sought to identify gene mutations associated with STGD1 in a three-generation Han Chinese pedigree by whole exome sequencing and Sanger sequencing. Two novel potentially pathogenic variants in a compound heterozygous state, c.3607G>T (p.(Gly1203Trp)) and c.6722T>C (p.(Leu2241Pro)), in the ATP binding cassette subfamily A member 4 gene (ABCA4) were identified as contributing to the family's STGD1 phenotype. These variants may impact the ABCA4 protein structure and reduce the retinal-activated ATPase activity, leading to abnormal all-trans retinal accumulation in photoreceptor outer segments and in retinal pigment epithelium cells. The present study broadens the mutational spectrum of the ABCA4 responsible for STGD1. A combination of whole exome sequencing and Sanger sequencing is likely to be a time-saving and cost-efficient approach to screen pathogenic variants in genetic disorders caused by sizable genes, as well as avoiding misdiagnosis. These results perhaps refine genetic counseling and ABCA4-targetted treatments for families affected by STGD1.

Keywords: ABCA4; Stargardt disease; missense variant; whole exome sequencing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • ATP-Binding Cassette Transporters / chemistry
  • ATP-Binding Cassette Transporters / genetics*
  • ATP-Binding Cassette Transporters / metabolism
  • Adult
  • Amino Acid Sequence
  • Animals
  • Asian People
  • Base Sequence
  • Case-Control Studies
  • Exome Sequencing
  • Female
  • Gene Expression
  • Heterozygote
  • Humans
  • Macular Degeneration / congenital*
  • Macular Degeneration / ethnology
  • Macular Degeneration / genetics
  • Macular Degeneration / metabolism
  • Macular Degeneration / pathology
  • Male
  • Models, Molecular
  • Pedigree
  • Phenotype
  • Polymorphism, Genetic*
  • Protein Conformation, alpha-Helical
  • Protein Conformation, beta-Strand
  • Retinal Pigment Epithelium / metabolism*
  • Retinal Pigment Epithelium / pathology
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Stargardt Disease

Substances

  • ABCA4 protein, human
  • ATP-Binding Cassette Transporters