Sphingobium aromaticivastans sp. nov., a novel aniline- and benzene-degrading, and antimicrobial compound producing bacterium

Arch Microbiol. 2019 Mar;201(2):155-161. doi: 10.1007/s00203-018-1611-2. Epub 2018 Dec 17.

Abstract

A strictly aerobic, orange-pigmented strain was isolated and designated as UCM-25T. This strain is capable of degrading aniline and benzene, while is also producing antimicrobial compounds which inhibit the growth of some common pathogenic microbes. A near full-length 16S rRNA gene sequence revealed similarity to Sphingobium chlorophenolicum NBRC 16172T (98.6%). The level of DNA-DNA hybridization between the new isolate and the related species suggests UCM-25T to be a new species belonging to the genus Sphingobium. The bacterial cells contained phosphatidylglycerol, phosphatidylethanolamine, sphingoglycolipid, phosphatidylcholine, phosphatidylmonomethylethanolamine, phosphatidyldimethylethanolamine, three unidentified polar lipids, and an unidentified aminophospholipid. Ubiquinone Q-10 was the major quinone and spermidine was the major polyamine. The G+C content in the DNA of strain UCM-25T was 62.9 mol%. Cells contained summed feature 8 (C18:1ω7c and/or C18:1ω6c), summed feature 3 (C16:1ω7c and/or C16:1ω6c), C16:0, and C14:0 2-OH as major fatty acids. Based on the comparison of phenotypic, genotypic, and chemotaxonomic characteristics, strain UCM-25T represents a new member of the genus Sphingobium, for which the name S. aromaticivastans sp. nov. is proposed. The type strain is UCM-25T (=KACC 19288T =DSM 105181T).

Keywords: Antimicrobial compound; Aromatic hydrocarbon; Degradation; Soil; Sphingobium aromaticivastans sp. nov..

MeSH terms

  • Aniline Compounds / metabolism
  • Anti-Bacterial Agents / metabolism*
  • Base Composition
  • Benzene / metabolism
  • DNA, Bacterial / chemistry
  • Fatty Acids / analysis
  • Phospholipids / analysis
  • Spermidine / metabolism
  • Sphingomonadaceae / chemistry
  • Sphingomonadaceae / classification
  • Sphingomonadaceae / genetics
  • Sphingomonadaceae / metabolism*
  • Ubiquinone / analogs & derivatives
  • Ubiquinone / metabolism

Substances

  • Aniline Compounds
  • Anti-Bacterial Agents
  • DNA, Bacterial
  • Fatty Acids
  • Phospholipids
  • Ubiquinone
  • coenzyme Q10
  • Benzene
  • aniline
  • Spermidine