Genome sequence of Methylocystis hirsuta CSC1, a polyhydroxyalkanoate producing methanotroph

Microbiologyopen. 2019 Jun;8(6):e00771. doi: 10.1002/mbo3.771. Epub 2018 Dec 12.

Abstract

Polyhydroxyalkanoates (PHAs) are biodegradable plastics that can be produced by some methanotrophic organisms such as those of the genus Methylocystis. This allows the conversion of a detrimental greenhouse gas into an environmentally friendly high added-value bioproduct. This study presents the genome sequence of Methylocystis hirsuta CSC1 (a high yield PHB producer). The genome comprises 4,213,043 bp in 4 contigs, with the largest contig being 3,776,027 bp long. Two of the other contigs are likely to correspond to large size plasmids. A total of 4,664 coding sequences were annotated, revealing a PHA production cluster, two distinct particulate methane monooxygenases with active catalytic sites, as well as a nitrogen fixation operon and a partial denitrification pathway.

Keywords: genome; methane monooxygenases; methanotrophs; methylocystis; polyhydroxyalkanoates.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Base Sequence
  • Genome, Bacterial*
  • Methane / metabolism
  • Methylocystaceae / classification
  • Methylocystaceae / genetics*
  • Methylocystaceae / isolation & purification
  • Methylocystaceae / metabolism
  • Oxygenases / genetics
  • Oxygenases / metabolism
  • Plasmids / genetics
  • Polyhydroxyalkanoates / biosynthesis*

Substances

  • Bacterial Proteins
  • Polyhydroxyalkanoates
  • Oxygenases
  • methane monooxygenase
  • Methane

Supplementary concepts

  • Methylocystis hirsuta