Proteomic Characterization of Bradyrhizobium diazoefficiens Bacteroids Reveals a Post-Symbiotic, Hemibiotrophic-Like Lifestyle of the Bacteria within Senescing Soybean Nodules

Int J Mol Sci. 2018 Dec 8;19(12):3947. doi: 10.3390/ijms19123947.

Abstract

The form and physiology of Bradyrhizobium diazoefficiens after the decline of symbiotic nitrogen fixation has been characterized. Proteomic analyses showed that post-symbiotic B. diazoefficiens underwent metabolic remodeling as well-defined groups of proteins declined, increased or remained unchanged from 56 to 119 days after planting, suggesting a transition to a hemibiotrophic-like lifestyle. Enzymatic analysis showed distinct patterns in both the cytoplasm and the periplasm. Similar to the bacteroid, the post-symbiotic bacteria rely on a non-citric acid cycle supply of succinate and, although viable, they did not demonstrate the ability to grow within the senescent nodule.

Keywords: Bradyrhizobium diazoefficiens; Glycine max; hemibiotroph; nitrogen fixation; proteomics; senescence; soybean.

MeSH terms

  • Bacterial Proteins / metabolism
  • Bacteroides / enzymology
  • Bacteroides / isolation & purification
  • Bacteroides / metabolism*
  • Bradyrhizobium / metabolism*
  • Glycine max / growth & development*
  • Glycine max / microbiology*
  • Hydroxybutyrates / metabolism
  • Leghemoglobin / metabolism
  • Periplasm / metabolism
  • Polyesters / metabolism
  • Proteomics / methods*
  • Root Nodules, Plant / microbiology*
  • Symbiosis*

Substances

  • Bacterial Proteins
  • Hydroxybutyrates
  • Leghemoglobin
  • Polyesters
  • poly-beta-hydroxybutyrate