Nitrate boosts anaerobic ethanol production in an acetate-dependent manner in the yeast Dekkera bruxellensis

J Ind Microbiol Biotechnol. 2019 Feb;46(2):209-220. doi: 10.1007/s10295-018-2118-1. Epub 2018 Dec 11.

Abstract

In the past few years, the yeast Dekkera bruxellensis has gained much of attention among the so-called non-conventional yeasts for its potential in the biotechnological scenario, especially in fermentative processes. This yeast has been regarded as an important competitor to Saccharomyces cerevisiae in bioethanol production plants in Brazil and several studies have reported its capacity to produce ethanol. However, our current knowledge concerning D. bruxellensis is restricted to its aerobic metabolism, most likely because wine and beer strains cannot grow in full anaerobiosis. Hence, the present work aimed to fulfil a gap regarding the lack of information on the physiology of Dekkera bruxellensis growing in the complete absence of oxygen and the relationship with assimilation of nitrate as nitrogen source. The ethanol strain GDB 248 was fully capable of growing anaerobically and produces ethanol at the same level of S. cerevisiae. The presence of nitrate in the medium increased this capacity. Moreover, nitrate is consumed faster than ammonium and this increased rate coincided with a higher speed of glucose consumption. The profile of gene expression helped us to figure out that even in anaerobiosis, the presence of nitrate drives the yeast cells to an oxidative metabolism that ultimately incremented both biomass and ethanol production. These results finally provide the clues to explain most of the success of this yeast in industrial processes of ethanol production.

Keywords: Acetate metabolism; Anaerobic growth; Energetic demand; Ethanol; Nitrogen catabolite repression.

MeSH terms

  • Acetic Acid / metabolism*
  • Ammonium Compounds / metabolism
  • Anaerobiosis
  • Beer / microbiology
  • Biomass
  • Brazil
  • Dekkera / drug effects*
  • Dekkera / metabolism
  • Ethanol / metabolism*
  • Fermentation
  • Food Handling
  • Food Microbiology
  • Fungal Proteins / genetics
  • Fungal Proteins / metabolism
  • Gene Expression Regulation, Fungal
  • Glucose / metabolism
  • Glutamate Dehydrogenase (NADP+) / genetics
  • Glutamate Dehydrogenase (NADP+) / metabolism
  • Nitrates / metabolism*
  • Nitrogen / metabolism
  • RNA, Fungal / genetics
  • RNA, Fungal / isolation & purification
  • Saccharomyces cerevisiae / drug effects
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins / genetics
  • Saccharomyces cerevisiae Proteins / metabolism
  • Wine / microbiology

Substances

  • Ammonium Compounds
  • Fungal Proteins
  • Nitrates
  • RNA, Fungal
  • Saccharomyces cerevisiae Proteins
  • Ethanol
  • GDH1 protein, S cerevisiae
  • Glutamate Dehydrogenase (NADP+)
  • Glucose
  • Nitrogen
  • Acetic Acid