Photochemical study of a cyanobacterial chloride-ion pumping rhodopsin

Biochim Biophys Acta Bioenerg. 2019 Feb 1;1860(2):136-146. doi: 10.1016/j.bbabio.2018.12.001. Epub 2018 Dec 7.

Abstract

Mastigocladopsis repens halorhodopsin (MrHR) is a Cl--pumping rhodopsin that belongs to a distinct cluster far from other Cl- pumps. We investigated its pumping function by analyzing its photocycle and the effect of amino acid replacements. MrHR can bind I- similar to Cl- but cannot transport it. I--bound MrHR undergoes a photocycle but lacks the intermediates after L, suggesting that, in the Cl--pumping photocycle, Cl- moves to the cytoplasmic (CP) channel during L decay. A photocycle similar to that of the I--bound form was also observed for a mutant of the Asp200 residue, which is superconserved and assumed to be deprotonated in most microbial rhodopsins. This residue is probably close to the Cl--binding site and the protonated Schiff base, in which a chromophore retinal binds to a specific Lys residue. However, the D200N mutation affected neither the Cl--binding affinity nor the absorption spectrum, but completely eliminated the Cl--pumping function. Thus, the Asp200 residue probably protonates in the dark state but deprotonates during the photocycle. Indeed, a H+ release was detected for photolyzed MrHR by using an indium‑tin oxide electrode, which acts as a good time-resolved pH sensor. This H+ release disappeared in the I--bound form of the wild-type and Cl--bound form of the D200N mutant. Thus, Asp200 residue probably deprotonates during L decay and then drives the Cl- movement to the CP channel.

Keywords: Flash photolysis; Halorhodopsin; Light-driven chloride pump; Microbial rhodopsin; Photocycle.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Substitution
  • Chlorides / metabolism*
  • Cyanobacteria / chemistry*
  • Halorhodopsins / metabolism*
  • Photolysis
  • Photoperiod
  • Protons
  • Rhodopsins, Microbial / metabolism

Substances

  • Chlorides
  • Halorhodopsins
  • Protons
  • Rhodopsins, Microbial