Identification of an Arginase II Inhibitor via RapidFire Mass Spectrometry Combined with Hydrophilic Interaction Chromatography

SLAS Discov. 2019 Apr;24(4):457-465. doi: 10.1177/2472555218812663. Epub 2018 Dec 7.

Abstract

Peripheral arterial disease (PAD) is an occlusive disease that can lead to atherosclerosis. The involvement of arginase II (Arg II) in PAD progression has been proposed. However, no promising drugs targeting Arg II have been developed to date for the treatment of PAD. In this study, we established a method for detecting the activity of Arg II via high-throughput label-free RapidFire mass spectrometry using hydrophilic interaction chromatography, which enables the direct measurement of l-ornithine produced by Arg II. This approach facilitated a robust high-concentration screening of fragment compounds and the identification of a fragment that inhibits the activity of Arg II. We further confirmed binding of the fragment to the potential allosteric site of Arg II using a surface plasmon resonance assay. We concluded that the identified fragment is a promising compound that may lead to novel drugs to treat PAD, and our method for detecting the activity of Arg II can be applied to large-scale high-throughput screening to identify other structural types of Arg II inhibitors.

Keywords: RapidFire mass spectrometry; arginase II; fragment-based drug discovery; hydrophilic interaction liquid chromatography; peripheral arterial disease.

MeSH terms

  • Animals
  • Arginase / antagonists & inhibitors*
  • Arginase / genetics
  • Arginase / isolation & purification
  • Chromatography, Liquid / methods*
  • Drug Discovery
  • Enzyme Inhibitors / pharmacology*
  • Enzyme Inhibitors / therapeutic use
  • Humans
  • Hydrophobic and Hydrophilic Interactions
  • Mice
  • Mice, Knockout
  • Peripheral Arterial Disease / drug therapy
  • Peripheral Arterial Disease / enzymology
  • Tandem Mass Spectrometry / methods*

Substances

  • Enzyme Inhibitors
  • Arginase