New insights into the adaptive transcriptional response to nitrogen starvation in Escherichia coli

Biochem Soc Trans. 2018 Dec 17;46(6):1721-1728. doi: 10.1042/BST20180502. Epub 2018 Dec 4.

Abstract

Bacterial adaptive responses to biotic and abiotic stresses often involve large-scale reprogramming of the transcriptome. Since nitrogen is an essential component of the bacterial cell, the transcriptional basis of the adaptive response to nitrogen starvation has been well studied. The adaptive response to N starvation in Escherichia coli is primarily a 'scavenging response', which results in the transcription of genes required for the transport and catabolism of nitrogenous compounds. However, recent genome-scale studies have begun to uncover and expand some of the intricate regulatory complexities that underpin the adaptive transcriptional response to nitrogen starvation in E. coli The purpose of this review is to highlight some of these new developments.

Keywords: Escherichia coli; RNA polymerase; nitrogen metabolism; transcriptomics.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • DNA-Directed RNA Polymerases / genetics
  • DNA-Directed RNA Polymerases / metabolism
  • Escherichia coli / genetics
  • Escherichia coli / metabolism*
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism
  • Gene Expression Regulation, Bacterial
  • Nitrogen / deficiency*
  • Nitrogen / metabolism*
  • Transcriptome / genetics

Substances

  • Escherichia coli Proteins
  • DNA-Directed RNA Polymerases
  • Nitrogen