Adaptive filtering of physiological noises in fNIRS data

Biomed Eng Online. 2018 Dec 4;17(1):180. doi: 10.1186/s12938-018-0613-2.

Abstract

The study presents a recursive least-squares estimation method with an exponential forgetting factor for noise removal in functional near-infrared spectroscopy data and extraction of hemodynamic responses (HRs) from the measured data. The HR is modeled as a linear regression form in which the expected HR, the first and second derivatives of the expected HR, a short-separation measurement data, three physiological noises, and the baseline drift are included as components in the regression vector. The proposed method is applied to left-motor-cortex experiments on the right thumb and little finger movements in five healthy male participants. The algorithm is evaluated with respect to its performance improvement in terms of contrast-to-noise ratio in comparison with Kalman filter, low-pass filtering, and independent component method. The experimental results show that the proposed model achieves reductions of 77% and 99% in terms of the number of channels exhibiting higher contrast-to-noise ratios in oxy-hemoglobin and deoxy-hemoglobin, respectively. The approach is robust in obtaining consistent HR data. The proposed method is applied for both offline and online noise removal.

Keywords: Exponential forgetting; Functional near-infrared spectroscopy (fNIRS); Hemodynamic response (HR); Real time estimation; Recursive least squares estimation (RLSE); State space model.

MeSH terms

  • Adult
  • Brain / physiology
  • Data Analysis*
  • Hemodynamics*
  • Humans
  • Linear Models
  • Male
  • Signal-To-Noise Ratio*
  • Spectroscopy, Near-Infrared*