Structure of undecaprenyl pyrophosphate synthase from Acinetobacter baumannii

Acta Crystallogr F Struct Biol Commun. 2018 Dec 1;74(Pt 12):765-769. doi: 10.1107/S2053230X18012931. Epub 2018 Nov 16.

Abstract

Undecaprenyl pyrophosphate (UPP) is an important carrier of the oligosaccharide component in peptidoglycan synthesis. Inhibition of UPP synthase (UPPS) may be an effective strategy in combating the pathogen Acinetobacter baumannii, which has evolved to be multidrug-resistant. Here, A. baumannii UPPS (AbUPPS) was cloned, expressed, purified and crystallized, and its structure was determined by X-ray diffraction. Each chain of the dimeric protein folds into a central β-sheet with several surrounding α-helices, including one at the C-terminus. In the active site, two molecules of citrate interact with the side chains of the catalytic aspartate and serine. These observations may provide a structural basis for inhibitor design against AbUPPS.

Keywords: Acinetobacter baumannii; peptidoglycan; undecaprenyl pyrophosphate synthase.

MeSH terms

  • Acinetobacter baumannii / chemistry*
  • Acinetobacter baumannii / enzymology*
  • Acinetobacter baumannii / genetics
  • Alkyl and Aryl Transferases / chemistry*
  • Alkyl and Aryl Transferases / genetics
  • Amino Acid Sequence
  • Crystallization / methods
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • X-Ray Diffraction / methods

Substances

  • Alkyl and Aryl Transferases
  • undecaprenyl pyrophosphate synthetase