Synthesis, molecular modeling and BACE-1 inhibitory study of tetrahydrobenzo[b] pyran derivatives

Bioorg Chem. 2019 Mar:84:202-210. doi: 10.1016/j.bioorg.2018.11.023. Epub 2018 Nov 19.

Abstract

β-Secretase (BACE1) has been broadly documented as one of the possible therapeutic targets for the treatment of Alzheimer's disease. In this paper, we report the synthesis and the for β-secretase (BACE-1) inhibitory activity of new series of tetrahydrobenzo [b] pyran derivatives. One-pot synthesis of tetrahydrobenzo [b] pyrans was carried out by condensing aromatic aldehyde, malononitrile and 1,3-cyclohexanedione using ionic liquid 1-butyl-3-methyl imidazolium chloride ([bmIm]Cl-) in aqueous alcohol media. The addition of alcohol and water in the ratio of 1:2 keeps all the reactants in solution which facilitates the reaction and makes the product formation very easy. The synthesized compounds were subjected to BACE1 inhibition assay and six compounds, 4d, 4e, 4f, 4h, 4i, and 4p have shown significant IC50 values at micromolar level. Among these six active compounds, 4e was a potential inhibitor with its IC50 value in nanomolar range. All the synthesized compounds were docked onto the active site of β-Secretase enzyme.

Keywords: 1-Butyl-3-imidazolium chloride; Ionic liquid; Molecular docking; Surflex dock; Tetrahydrobenzo [b] pyrans; β-secretase.

MeSH terms

  • Aldehydes / chemistry
  • Amyloid Precursor Protein Secretases / antagonists & inhibitors*
  • Amyloid Precursor Protein Secretases / metabolism
  • Binding Sites
  • Catalytic Domain
  • Humans
  • Inhibitory Concentration 50
  • Ionic Liquids / chemistry
  • Molecular Docking Simulation*
  • Protease Inhibitors / chemical synthesis*
  • Protease Inhibitors / metabolism
  • Pyrans / chemical synthesis
  • Pyrans / chemistry*
  • Pyrans / metabolism
  • Structure-Activity Relationship

Substances

  • Aldehydes
  • Ionic Liquids
  • Protease Inhibitors
  • Pyrans
  • Amyloid Precursor Protein Secretases