Targeting the Pentose Phosphate Pathway: Characterization of a New 6PGL Inhibitor

Biophys J. 2018 Dec 4;115(11):2114-2126. doi: 10.1016/j.bpj.2018.10.027. Epub 2018 Nov 6.

Abstract

Human African trypanosomiasis, or sleeping sickness, is a lethal disease caused by the protozoan parasite Trypanosoma brucei. However, although many efforts have been made to understand the biochemistry of this parasite, drug development has led to treatments that are of limited efficiency and of great toxicity. To develop new drugs, new targets must be identified, and among the several metabolic processes of trypanosomes that have been proposed as drug targets, carbohydrate metabolism (glycolysis and the pentose phosphate pathway (PPP)) appears as a promising one. As far as the PPP is concerned, a limited number of studies are related to the glucose-6-phosphate dehydrogenase. In this work, we have focused on the activity of the second PPP enzyme (6-phospho-gluconolactonase (6PGL)) that transforms 6-phosphogluconolactone into 6-phosphogluconic acid. A lactam analog of the natural substrate has been synthesized, and binding of the ligand to 6PGL has been investigated by NMR titration. The ability of this ligand to inhibit 6PGL has also been demonstrated using ultraviolet experiments, and protein-inhibitor interactions have been investigated through docking calculations and molecular dynamics simulations. In addition, a marginal inhibition of the third enzyme of the PPP (6-phosphogluconate dehydrogenase) was also demonstrated. Our results thus open new prospects for targeting T. brucei.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carboxylic Ester Hydrolases / metabolism*
  • Enzyme Inhibitors / pharmacology*
  • Gluconates / metabolism
  • Glycolysis
  • Lactams / chemical synthesis
  • Lactams / pharmacology*
  • Models, Molecular
  • Pentose Phosphate Pathway*
  • Phosphogluconate Dehydrogenase / antagonists & inhibitors*
  • Phosphogluconate Dehydrogenase / metabolism
  • Substrate Specificity
  • Trypanosoma brucei brucei / enzymology*

Substances

  • Enzyme Inhibitors
  • Gluconates
  • Lactams
  • Phosphogluconate Dehydrogenase
  • Carboxylic Ester Hydrolases
  • gluconolactonase
  • 6-phosphogluconic acid