Exploring the genome of Arctic Psychrobacter sp. DAB_AL32B and construction of novel Psychrobacter-specific cloning vectors of an increased carrying capacity

Arch Microbiol. 2019 Jul;201(5):559-569. doi: 10.1007/s00203-018-1595-y. Epub 2018 Nov 17.

Abstract

Cold-active bacteria are currently of great interest in biotechnology, and their genomic and physiological features have been extensively studied. One of the model psychrotolerant bacteria are Psychrobacter spp. Analysis of Arctic psychrophilic Psychrobacter sp. DAB_AL32B genome content provided an insight into its overall stress response, and genes conferring protection against various life-limiting factors (i.e., low temperature, increased ultraviolet radiation, oxidative stress and osmotic pressure) were recognized and described. Moreover, it was revealed that the strain carries a large plasmid pP32BP2. Its replication system was used for the construction of two novel shuttle vectors (pPS-NR-Psychrobacter-Escherichia coli-specific plasmid and pPS-BR-Psychrobacter-various Proteobacteria-specific plasmid) of an increased carrying capacity, which may be used for genetic engineering of Psychrobacter spp.

Keywords: Draft genome sequence; Psychrobacter sp. DAB_AL32B; Psychrobacter-specific vector; Stress adaptation.

MeSH terms

  • Arctic Regions
  • Cold Temperature
  • Conservation of Natural Resources
  • Escherichia coli / genetics
  • Genetic Vectors / genetics*
  • Genome, Bacterial / genetics*
  • Genomics / methods
  • Plasmids / genetics*
  • Psychrobacter / genetics*
  • Ultraviolet Rays