Tumor Segmentation in Contrast-Enhanced Magnetic Resonance Imaging for Nasopharyngeal Carcinoma: Deep Learning with Convolutional Neural Network

Biomed Res Int. 2018 Oct 17:2018:9128527. doi: 10.1155/2018/9128527. eCollection 2018.

Abstract

Objectives: To evaluate the application of a deep learning architecture, based on the convolutional neural network (CNN) technique, to perform automatic tumor segmentation of magnetic resonance imaging (MRI) for nasopharyngeal carcinoma (NPC).

Materials and methods: In this prospective study, 87 MRI containing tumor regions were acquired from newly diagnosed NPC patients. These 87 MRI were augmented to >60,000 images. The proposed CNN network is composed of two phases: feature representation and scores map reconstruction. We designed a stepwise scheme to train our CNN network. To evaluate the performance of our method, we used case-by-case leave-one-out cross-validation (LOOCV). The ground truth of tumor contouring was acquired by the consensus of two experienced radiologists.

Results: The mean values of dice similarity coefficient, percent match, and their corresponding ratio with our method were 0.89±0.05, 0.90±0.04, and 0.84±0.06, respectively, all of which were better than reported values in the similar studies.

Conclusions: We successfully established a segmentation method for NPC based on deep learning in contrast-enhanced magnetic resonance imaging. Further clinical trials with dedicated algorithms are warranted.

MeSH terms

  • Algorithms
  • Deep Learning
  • Humans
  • Image Processing, Computer-Assisted / methods
  • Machine Learning
  • Magnetic Resonance Imaging / methods*
  • Nasopharyngeal Carcinoma / pathology*
  • Neural Networks, Computer
  • Prospective Studies