Extracellular microvesicle microRNAs as predictive biomarkers for targeted therapy in metastastic cutaneous malignant melanoma

PLoS One. 2018 Nov 6;13(11):e0206942. doi: 10.1371/journal.pone.0206942. eCollection 2018.

Abstract

Background: Mitogen activated-protein kinase pathway inhibitors (MAPKis) improve treatment outcome in patients with disseminated BRAFV600 mutant cutaneous malignant melanoma (CMM) but responses are of limited duration due to emerging resistance. Although extensive research in mechanisms of resistance is being performed, predictive biomarkers for durable responses are still lacking. We used miRNA qPCR to investigate if different levels of extracellular microvesicle microRNA (EV miRNA) in matched plasma samples collected from patients with metastatic IV BRAFV600 mutated CMM before, during and after therapy with MAPKis could serve as predictive biomarkers.

Materials and methods: EV miRNAs were extracted from plasma samples from 28 patients collected before and during therapy, measured by quantitative PCR-array and correlated to therapy outcome.

Results: Increased levels of EV let-7g-5p during treatment compared to before treatment (EV let-7g-5p_delta) were associated with better disease control with MAPKis (odds ratio 8568.4, 95% CI = 4.8-1.5e+07, P = 0.000036). Elevated levels of EV miR-497-5p during therapy were associated with prolonged progression free survival (PFS) (hazard ratio = 0.27, 95% CI = 0.13-0.52, P <0.000061).

Conclusions: EV miRNAs let-7g-5p and miR-497-5p were identified as putative novel predictive biomarkers of MAPKi treatment benefit in metastatic CMM patients highlighting the potential relevance of assessing EV miRNA during and after treatment to unravel novel mechanisms of resistance.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Biomarkers, Tumor / blood*
  • Cell-Derived Microparticles / genetics
  • Drug Resistance, Neoplasm / genetics
  • Extracellular Vesicles / genetics
  • Female
  • Gene Expression Regulation, Neoplastic / drug effects
  • Humans
  • Male
  • Melanoma / blood
  • Melanoma / drug therapy*
  • Melanoma / genetics
  • Melanoma / pathology
  • MicroRNAs / blood*
  • Middle Aged
  • Progression-Free Survival
  • Protein Kinase Inhibitors / administration & dosage
  • Proto-Oncogene Proteins B-raf / genetics

Substances

  • Biomarkers, Tumor
  • MIRN497 microRNA, human
  • MicroRNAs
  • Protein Kinase Inhibitors
  • mirnlet7 microRNA, human
  • BRAF protein, human
  • Proto-Oncogene Proteins B-raf

Grants and funding

This work was supported by: to AP: the Swedish Cancer Society (Cancerfonden) (grant number CAN 2015/694) https://www.cancerfonden.se/; the Swedish Research Council (Vetenskapsrådet) (grant number 2015-02844 https://www.vr.se; the Swedish Skin Foundation (Hudfonden) (grant number 2558) https://www.hudfonden.se/; to JH: the Cancer Research Funds of Radiumhemmet (grant number 144073) https://www.rahfo.se/om-oss/in-english/, the Swedish Research Council (Vetenskapsrådet) (grant numbers D0322301); the Swedish Cancer Society (Cancerfonden) (grant numbers 150574); the Knut and Alice Wallenberg Foundation (grant number Dnr KAW 2013.0093), https://kaw.wallenberg.org/; and the Stockholm County Council (ALF) (grant number LS2015-1198), https://forskningsstod.vmi.se/Ansokan/start.asp; to HE: Swedish Medical Society SLS 6844391, https://forskningsstod.vmi.se/Ansokan/start.asp; Radiumhemmet Research Funds 161052; The Swedish Cancer Society CAN2014-424; The Swedish Society for Medical Research 160502, https://www.ssmf.se/in-english; KI funds 2016fobi50190, https://fonder.ki.se/; Axel and Eva Wallström funds 2018-00222, https://ki.se/medarbetare/alex-och-eva-wallstroms-stiftelse-for-vetenskaplig-forskning-och-utbildning.