Real-time classification of experience-related ensemble spiking patterns for closed-loop applications

Elife. 2018 Oct 30:7:e36275. doi: 10.7554/eLife.36275.

Abstract

Communication in neural circuits across the cortex is thought to be mediated by spontaneous temporally organized patterns of population activity lasting ~50 -200 ms. Closed-loop manipulations have the unique power to reveal direct and causal links between such patterns and their contribution to cognition. Current brain-computer interfaces, however, are not designed to interpret multi-neuronal spiking patterns at the millisecond timescale. To bridge this gap, we developed a system for classifying ensemble patterns in a closed-loop setting and demonstrated its application in the online identification of hippocampal neuronal replay sequences in the rat. Our system decodes multi-neuronal patterns at 10 ms resolution, identifies within 50 ms experience-related patterns with over 70% sensitivity and specificity, and classifies their content with 95% accuracy. This technology scales to high-count electrode arrays and will help to shed new light on the contribution of internally generated neural activity to coordinated neural assembly interactions and cognition.

Keywords: hippocampal replay; memory; neural decoding; neuroscience; rat.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Action Potentials*
  • Algorithms
  • Animals
  • Brain-Computer Interfaces*
  • Hippocampus / physiology*
  • Nerve Net / physiology*
  • Neurons / physiology
  • Rats