Positive Selection in the Evolution of Mammalian CRISPs

J Mol Evol. 2018 Dec;86(9):635-645. doi: 10.1007/s00239-018-9872-6. Epub 2018 Oct 28.

Abstract

Cysteine-RIch Secretory Proteins (CRISPs) constitute a versatile family, with functions in reptilian venom and mammalian reproduction. Mammals generally express three CRISPs, four in mice, and all are highly expressed in male reproductive tissues, either testis or accessory organs. Because reproductive proteins often evolve adaptively in response to post-copulatory sexual selection, we hypothesized that mammalian CRISPs, with important roles in male reproduction, could have undergone positive selection promoting their divergence. We explored the molecular adaptation of mammalian CRISPs applying phylogenetic methods. Our analyses revealed the evidence of positive selection in all mammalian CRISPs. The intensity of positive selection was heterogeneous among CRISP members, being stronger in CRISP3 than in CRISP1 and CRISP2, and also across functional domains, having stronger impact on Pathogenesis-Related 1 (PR-1) in CRISP2 and on Ion Channel Regulator (ICR) in CRISP1 and CRISP3. In addition, we discovered a new CRISP in some rodent species, suggesting that the acquisition of new CRISP components could contribute to male reproductive success or to acquire new physiological roles. Signatures of positive selection were not focused on any particular mammalian group, suggesting that adaptive evolution is a recurrent pattern in mammalian CRISPs. Our findings support a model of CRISP family diversification driven by episodes of duplication and posterior neofunctionalization, and provide potential adaptive changes responsible for interspecific differences in CRISPs activity.

Keywords: CRISP; Fertility; Ion channel; Mammalian; Positive selection; Reproduction.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Biological Evolution
  • Cell Adhesion Molecules
  • Clustered Regularly Interspaced Short Palindromic Repeats / genetics*
  • Clustered Regularly Interspaced Short Palindromic Repeats / physiology*
  • Databases, Genetic
  • Evolution, Molecular
  • Glycoproteins / genetics
  • Glycoproteins / metabolism
  • Male
  • Mammals / genetics
  • Membrane Glycoproteins / genetics
  • Membrane Glycoproteins / metabolism
  • Membrane Proteins
  • Mice
  • Phylogeny
  • Reproduction
  • Salivary Proteins and Peptides / genetics
  • Salivary Proteins and Peptides / metabolism
  • Selection, Genetic / genetics
  • Seminal Plasma Proteins / genetics
  • Seminal Plasma Proteins / metabolism
  • Testis / metabolism

Substances

  • Cell Adhesion Molecules
  • Crisp1 protein, mouse
  • Crisp2 protein, mouse
  • Crisp3 protein, mouse
  • Glycoproteins
  • Membrane Glycoproteins
  • Membrane Proteins
  • Salivary Proteins and Peptides
  • Seminal Plasma Proteins