Synthesis, docking, ADMET prediction, cytotoxicity and antimicrobial activity of oxathiadiazole derivatives

Comput Biol Chem. 2018 Dec:77:226-239. doi: 10.1016/j.compbiolchem.2018.10.008. Epub 2018 Oct 16.

Abstract

A series of molecules bearing oxathiadiazole, a five membered heterocyclic ring has been designed, synthesized and screened for antimicrobial activity. Molecules, 1a, 1b, 1d, 3a-b and 4a-b were found to be highly active (MIC value upto 1.5 μg/mL) against different human pathogens, namely S. aureus, B. cerus, P. aeruginosa and E. coli. Some of the compounds, 1a, 1b and 1d have also shown the antifungal activity (MIC value upto 6.2 μg/mL) against Candida albicans, Candida glubrate and Candida crusei. During in vitro cytotoxicity study, the oxathiadiazole derivatives showed less toxicity than the reference used against PBM, CEM and Vero (African green monkey kidney) cell lines. Docking studies suggested that all designed ligands interacted well within active site of PDF enzyme (PDB ID: 1G2A). Oxathiadiazole ring of all ligands formed H-bond with amino acid Leu91 at a distance ranging between 2.5-2.8 Å and also exhibited π - + and π - π interactions with amino acid residues Arg97 and His132, respectively. In silico ADMET evaluations of compounds showed more than 90% intestinal absorption for all compounds except 4b (87.45%), which too was greater than the reference drugs sulfamethoxazole (76.46%) and chloramphenicol (69.94%). TOPKAT results also supported the lower cytotoxicity of all compounds.

Keywords: ADMET; Antimicrobial activity; Cytotoxicity; Molecular docking; Oxathiadiazoles.

MeSH terms

  • Amidohydrolases / metabolism
  • Animals
  • Anti-Infective Agents / chemical synthesis
  • Anti-Infective Agents / chemistry*
  • Anti-Infective Agents / pharmacology*
  • Bacteria / drug effects*
  • Bacteria / enzymology
  • Bacterial Infections / drug therapy
  • Candida / drug effects*
  • Candida / enzymology
  • Candidiasis / drug therapy
  • Catalytic Domain / drug effects
  • Cell Line
  • Chlorocebus aethiops
  • Drug Discovery
  • Humans
  • Molecular Docking Simulation
  • Thiadiazoles / chemical synthesis
  • Thiadiazoles / chemistry*
  • Thiadiazoles / pharmacology*
  • Vero Cells

Substances

  • Anti-Infective Agents
  • Thiadiazoles
  • Amidohydrolases
  • peptide deformylase