Streptomyces monticola sp. nov., a novel actinomycete isolated from soil

Antonie Van Leeuwenhoek. 2019 Mar;112(3):451-460. doi: 10.1007/s10482-018-1177-7. Epub 2018 Oct 9.

Abstract

A novel actinobacterium, designated strain NEAU-GS4T, was isolated from soil collected from Mount Song and characterised using a polyphasic approach. 16S rRNA gene sequence similarity studies showed that strain NEAU-GS4T belongs to the genus Streptomyces, being closely related to Streptomyces spectabilis JCM 4308T (98.8%), Streptomyces sclerotialus DSM 43032T (98.3%) and Streptomyces lasiicapitis 3H-HV17(2)T (98.0%). A multilocus sequence analysis based on five house-keeping genes (atpD, gyrB, rpoB, recA and trpB) also indicated that strain NEAU-GS4T should be assigned to the genus Streptomyces. The major menaquinones were identified as MK-9(H6), MK-9(H8) and MK-9(H4). The polar lipid profile was found to contain diphosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylethanolamine, phosphatidylinositolmannosides and an unidentified phospholipid. The major fatty acids were identified as anteiso-C15:0, iso-C16:0 and anteiso-C17:0. Moreover, DNA-DNA hybridization results and some phenotypic characteristics indicated that strain NEAU-GS4T can be clearly differentiated from its closely related species of the genus Streptomyces. Therefore, it is concluded that strain NEAU-GS4T represents a novel species of the genus of Streptomyces, for which the name Streptomyces monticola sp. nov. is proposed. The type stain is NEAU-GS4T (=CGMCC 4.7467T = DSM 105116T).

Keywords: 16S rRNA gene; Polyphasic taxonomy; Streptomyces monticola sp. nov..

MeSH terms

  • China
  • Cluster Analysis
  • Cytosol / chemistry
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Multilocus Sequence Typing
  • Nucleic Acid Hybridization
  • Phospholipids / analysis
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Soil Microbiology*
  • Streptomyces / classification*
  • Streptomyces / isolation & purification*
  • Vitamin K 2 / analysis

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Phospholipids
  • RNA, Ribosomal, 16S
  • Vitamin K 2