Fluorinated Prolines as Conformational Tools and Reporters for Peptide and Protein Chemistry

Biochemistry. 2018 Oct 30;57(43):6132-6143. doi: 10.1021/acs.biochem.8b00787. Epub 2018 Oct 16.

Abstract

Amide bonds at the proline nitrogen are particularly susceptible to rotation, affording cis and trans isomers. Installation of a stereochemically defined electron-withdrawing fluorine atom or fluorinated groups has the power to influence the cis- trans conformational preferences of the amide bond in X-(F)Pro (where X = any other amino acid). Advantageously, this also provides a sensitive reporter for 19F nuclear magnetic resonance (NMR) studies of protein conformation, interactions, and dynamics. We deliberately use the term "fluorinated prolines" as an all-encompassing term to describe proline analogues containing one or more fluorine atoms and to avoid confusion with the more well-known 4-fluoroprolines. This review presents a critical discussion of the growing repertoire of fluorinated prolines that have been described and, importantly, provides a comparison of their uses and relative influence on amide-bond conformation and discusses the significant potential of using 19F NMR as a tool to probe conformational changes in polypeptides.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Halogenation*
  • Magnetic Resonance Spectroscopy
  • Peptides / chemistry*
  • Proline / chemistry*
  • Protein Conformation
  • Proteins / chemistry*

Substances

  • Peptides
  • Proteins
  • Proline