Design, Synthesis, and Cytotoxic Analysis of Novel Hederagenin⁻Pyrazine Derivatives Based on Partial Least Squares Discriminant Analysis

Int J Mol Sci. 2018 Sep 30;19(10):2994. doi: 10.3390/ijms19102994.

Abstract

Hederagenin (He) is a novel triterpene template for the development of new antitumor compounds. In this study, 26 new He⁻pyrazine derivatives were synthetized in an attempt to develop potent antitumor agents; they were screened for in vitro cytotoxicity against tumor and non-tumor cell lines. The majority of these derivatives showed much stronger cytotoxic activity than He. Remarkably, the most potent was compound 9 (half maximal inhibitory concentration (IC50) was 3.45 ± 0.59 μM), which exhibited similar antitumor activities against A549 (human non-small-cell lung cancer) as the positive drug cisplatin (DDP; IC50 was 3.85 ± 0.63 μM), while it showed lower cytotoxicity on H9c2 (murine heart myoblast; IC50 was 16.69 ± 0.12 μM) cell lines. Compound 9 could induce the early apoptosis and evoke cell-cycle arrest at the synthesis (S) phase of A549 cells. Impressively, we innovatively introduced the method of cluster analysis modeled as partial least squares discriminant analysis (PLS-DA) into the structure⁻activity relationship (SAR) evaluation, and SAR confirmed that pyrazine had a profound effect on the antitumor activity of He. The present studies highlight the importance of pyrazine derivatives of He in the discovery and development of novel antitumor agents.

Keywords: PLS-DA; antitumor activity; apoptosis; hederagenin; pyrazine.

MeSH terms

  • Apoptosis / drug effects
  • Cell Cycle / drug effects
  • Cell Death
  • Cell Line, Tumor
  • Cell Shape / drug effects
  • Cluster Analysis
  • Discriminant Analysis
  • Drug Design*
  • Humans
  • Inhibitory Concentration 50
  • Least-Squares Analysis
  • Oleanolic Acid / analogs & derivatives*
  • Oleanolic Acid / chemical synthesis
  • Oleanolic Acid / chemistry
  • Oleanolic Acid / toxicity
  • Principal Component Analysis
  • Pyrazines / chemical synthesis*
  • Pyrazines / chemistry
  • Pyrazines / toxicity*
  • Staining and Labeling
  • Structure-Activity Relationship

Substances

  • Pyrazines
  • Oleanolic Acid
  • hederagenin