Selective Detection of DNA from Viable Mycobacterium tuberculosis Complex Strains Using the EMA-PCR Method

Jpn J Infect Dis. 2019 Jan 23;72(1):19-22. doi: 10.7883/yoken.JJID.2018.111. Epub 2018 Sep 28.

Abstract

In this study, the ability to discriminate viable from dead cells of Mycobacterium tuberculosis complex (MTC), using an ethidium monoazide (EMA) treatment-dependent viable bacteria selection PCR kit was examined. Detection of dead bacteria was possible for bacterial concentrations in the range 1.5 × 107-3.0 × 107 CFU/mL, which was equivalent to McFarland No. 0.05-0.10. There was a significant difference between the results for viable and dead bacteria, and the sensitivity and specificity of this method for culture-negative samples from patients were 83% and 100%, respectively. To the best of our knowledge, this is the first successful selective detection of DNA from viable cells of MTC by EMA-PCR, using the viable bacteria selection kit for PCR (gram-positive), an EMA treatment kit. We believe that application of this method could promote earlier discharge of patients undergoing tuberculosis treatment by discriminating dead from viable cells.

Keywords: Mycobacterium tuberculosis; PCR; ethidium monoazide; propidium monoazide.

Publication types

  • Evaluation Study

MeSH terms

  • Bacterial Load / methods*
  • DNA, Bacterial / analysis*
  • DNA, Bacterial / genetics
  • Diagnosis, Differential
  • Humans
  • Microbial Viability
  • Mycobacterium tuberculosis / genetics*
  • Polymerase Chain Reaction*
  • Reagent Kits, Diagnostic
  • Sensitivity and Specificity
  • Sputum / microbiology
  • Tuberculosis / diagnosis*
  • Tuberculosis / microbiology
  • Tuberculosis / therapy

Substances

  • DNA, Bacterial
  • Reagent Kits, Diagnostic