Computation of exact g-factor maps in 3D GRAPPA reconstructions

Magn Reson Med. 2019 Feb;81(2):1353-1367. doi: 10.1002/mrm.27469. Epub 2018 Sep 6.

Abstract

Purpose: To characterize the noise distributions in 3D-MRI accelerated acquisitions reconstructed with GRAPPA using an exact noise propagation analysis that operates directly in k-space.

Theory and methods: We exploit the extensive symmetries and separability in the reconstruction steps to account for the correlation between all the acquired k-space samples. Monte Carlo simulations and multi-repetition phantom experiments were conducted to test both the accuracy and feasibility of the proposed method; a high-resolution in-vivo experiment was performed to assess the applicability of our method to clinical scenarios.

Results: Our theoretical derivation shows that the direct k-space analysis renders an exact noise characterization under the assumptions of stationarity and uncorrelation in the original k-space. Simulations and phantom experiments provide empirical support to the theoretical proof. Finally, the high-resolution in-vivo experiment demonstrates the ability of the proposed method to assess the impact of the sub-sampling pattern on the overall noise behavior.

Conclusions: By operating directly in the k-space, the proposed method is able to provide an exact characterization of noise for any Cartesian pattern sub-sampled along the two phase-encoding directions. Exploitation of the symmetries and separability into independent blocks through the image reconstruction procedure allows us to overcome the computational challenges related to the very large size of the covariance matrices involved.

Keywords: GRAPPA; g-factor; magnetic resonance imaging; noise estimation; non-stationarity noise; parallel imaging.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Brain / diagnostic imaging
  • Brain Mapping*
  • Humans
  • Image Enhancement / methods
  • Image Processing, Computer-Assisted / methods*
  • Imaging, Three-Dimensional*
  • Magnetic Resonance Imaging*
  • Models, Statistical
  • Monte Carlo Method
  • Normal Distribution
  • Phantoms, Imaging
  • Reproducibility of Results
  • Software
  • Water

Substances

  • Water