Chemical space of Escherichia coli dihydrofolate reductase inhibitors: New approaches for discovering novel drugs for old bugs

Med Res Rev. 2019 Mar;39(2):684-705. doi: 10.1002/med.21538. Epub 2018 Sep 7.

Abstract

Escherichia coli Dihydrofolate reductase is an important enzyme that is essential for the survival of the Gram-negative microorganism. Inhibitors designed against this enzyme have demonstrated application as antibiotics. However, either because of poor bioavailability of the small-molecules resulting from their inability to cross the double membrane in Gram-negative bacteria or because the microorganism develops resistance to the antibiotics by mutating the DHFR target, discovery of new antibiotics against the enzyme is mandatory to overcome drug-resistance. This review summarizes the field of DHFR inhibition with special focus on recent efforts to effectively interface computational and experimental efforts to discover novel classes of inhibitors that target allosteric and active-sites in drug-resistant variants of EcDHFR.

Keywords: Escherichia coli; dihydrofolate reductase; drug resistance; quantitative structure-activity relationship; virtual ligand screening.

Publication types

  • Research Support, N.I.H., Extramural
  • Review

MeSH terms

  • Algorithms
  • Allosteric Site
  • Animals
  • Anti-Bacterial Agents / pharmacology*
  • Bacterial Infections / drug therapy*
  • Catalytic Domain
  • Drug Design
  • Drug Discovery
  • Enzyme Inhibitors / pharmacology*
  • Escherichia coli / enzymology*
  • Folic Acid Antagonists / pharmacology*
  • Humans
  • Ligands
  • Permeability / drug effects
  • Structure-Activity Relationship
  • Tetrahydrofolate Dehydrogenase / chemistry*

Substances

  • Anti-Bacterial Agents
  • Enzyme Inhibitors
  • Folic Acid Antagonists
  • Ligands
  • Tetrahydrofolate Dehydrogenase