Reproducible Research Using Biomodels

Bull Math Biol. 2018 Dec;80(12):3081-3087. doi: 10.1007/s11538-018-0498-z. Epub 2018 Sep 6.

Abstract

Like other types of computational research, modeling and simulation of biological processes (biomodels) is still largely communicated without sufficient detail to allow independent reproduction of results. But reproducibility in this area of research could easily be achieved by making use of existing resources, such as supplying models in standard formats and depositing code, models, and results in public repositories.

Keywords: Biomodels; Reproducibility; Standards.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Access to Information
  • Animals
  • Biomedical Research
  • Computational Biology
  • Computer Simulation
  • Databases, Factual
  • Humans
  • Mathematical Concepts
  • Models, Biological*
  • Publishing
  • Reproducibility of Results
  • Systems Biology