Direct Observation of H3-H4 Octasome by High-Speed AFM

Chemistry. 2018 Oct 26;24(60):15998-16002. doi: 10.1002/chem.201804010. Epub 2018 Oct 4.

Abstract

Despite evidence that histone H3 and H4 proteins may act as the precursor for orientating the DNA sequence to form nucleosome structures, there is no direct evidence of the formed compact structure. Here, it is demonstrated that a histone H3-H4 octasome could be constructed without the involvement of histone H2A-H2B under in vitro reconstitution conditions. Atomic force microscopy was used to obtain the first direct observation of the octasome structure, which exhibited a similar core-protein size as that of a nucleosome but with a shorter core histone-binding DNA region. The octasome also displayed a one-step histone-dissociation pattern under heat treatment, distinct micrococcal nuclease and peplomycin accessibility, which suggests a different wrapping pattern to that in nucleosomes.

Keywords: DNA recognition; DNA structures; H3-H4 octasome; atomic force microscopy; nucleosomes.