Statistical versus artificial intelligence -based modeling for the optimization of antifungal activity against Fusarium oxysporum using Streptomyces sp. strain TN71

J Mycol Med. 2018 Sep;28(3):551-560. doi: 10.1016/j.mycmed.2018.07.003. Epub 2018 Jul 26.

Abstract

A Streptomyces sp. strain TN71 was isolated from Tunisian Saharan soil and selected for its antimicrobial activity against phytopathogenic fungi. In an attempt to increase its anti-Fusarium oxysporum activity, GYM+S (glucose, yeast extract, malt extract and starch) culture medium was selected out of five different production media. Plackett-Burman design (PBD) was used to select yeast extract, malt extract and calcium carbonate (CaCO3) as parameters having significant effects on antifungal activity, and a Box-Behnken design was applied for further optimization. The analysis revealed that the optimum concentrations for the anti-F. oxysporum activity of the tested variables were yeast extract 5.03g/L, malt extract 8.05g/L and CaCO3 4.51g/L. Artificial Neural Networks (ANNs): the Multilayer perceptron (MLP) and the Radial basis function (RBF) were created to predict the anti-F. oxysporum activity. The comparison between experimental and predicted outputs from ANN and Response Surface Methodology (RSM) were studied. The ANN model presents an improvement of 14.73%. To our knowledge, this is the first work reporting the statistical versus artificial intelligence -based modeling for the optimization of bioactive molecules against mycotoxigenic and phytopathogenic fungi.

Keywords: Anti–F. oxysporum activity; Artificial neural network; Response surface methodology; Streptomyces sp. TN71 strain.

Publication types

  • Comparative Study
  • Evaluation Study

MeSH terms

  • Antifungal Agents / pharmacology*
  • Artificial Intelligence
  • Calibration
  • Computer Simulation*
  • Data Interpretation, Statistical
  • Fusarium / drug effects*
  • Fusarium / physiology
  • Humans
  • Microbial Sensitivity Tests / methods
  • Microbial Sensitivity Tests / statistics & numerical data
  • Models, Statistical*
  • Neural Networks, Computer
  • Streptomyces / drug effects*
  • Streptomyces / physiology

Substances

  • Antifungal Agents