Molecular analysis of Newcastle disease virus isolates reveals a novel XIId subgenotype in Vietnam

Arch Virol. 2018 Nov;163(11):3125-3130. doi: 10.1007/s00705-018-3961-0. Epub 2018 Jul 27.

Abstract

Eight Vietnamese Newcastle disease virus field isolates from 2008-2015 and 3 vaccine specimens were genotyped based on their full F gene sequences and compared to 80 reference strains representing all 18 genotypes. Three isolates formed a novel subgenotype XIId, identified for the first time in Vietnam; while the others clustered as follows: four in subgenotypes VIId and VIIh; two in Genotype I; and two in Genotype II. Evolutionary distance calculations confirmed the Vietnamese XIId isolates were distinct from XIIa and XIIb by 0.062-0.070; and from other genotypes by 0.089-0.245. This data demonstrated that a novel XIId subgenotype emerged in Vietnam indicating considerable genetic diversity, thus highlighting the need to implement antigenic matching during vaccination against NDVs.

MeSH terms

  • Animals
  • Chickens
  • Genetic Variation
  • Genotype
  • Newcastle Disease / virology*
  • Newcastle disease virus / classification
  • Newcastle disease virus / genetics*
  • Newcastle disease virus / isolation & purification*
  • Phylogeny
  • Poultry Diseases / virology*
  • Vietnam