Induced conformational changes activate the peptidoglycan synthase PBP1B

Mol Microbiol. 2018 Nov;110(3):335-356. doi: 10.1111/mmi.14082. Epub 2018 Oct 25.

Abstract

Bacteria surround their cytoplasmic membrane with an essential, stress-bearing peptidoglycan (PG) layer consisting of glycan chains linked by short peptides into a mesh-like structure. Growing and dividing cells expand their PG layer using inner-membrane anchored PG synthases, including Penicillin-binding proteins (PBPs), which participate in dynamic protein complexes to facilitate cell wall growth. In Escherichia coli, and presumably other Gram-negative bacteria, growth of the mainly single layered PG is regulated by outer membrane-anchored lipoproteins. The lipoprotein LpoB is required to activate PBP1B, which is a major, bi-functional PG synthase with glycan chain polymerising (glycosyltransferase) and peptide cross-linking (transpeptidase) activities. In this work we show how the binding of LpoB to the regulatory UB2H domain of PBP1B activates both activities. Binding induces structural changes in the UB2H domain, which transduce to the two catalytic domains by distinct allosteric pathways. We also show how an additional regulator protein, CpoB, is able to selectively modulate the TPase activation by LpoB without interfering with GTase activation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Allosteric Regulation
  • Bacterial Outer Membrane Proteins / metabolism*
  • Escherichia coli / enzymology*
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / metabolism*
  • Membrane Proteins / metabolism
  • Penicillin-Binding Proteins / chemistry*
  • Penicillin-Binding Proteins / metabolism*
  • Peptidoglycan / biosynthesis*
  • Peptidoglycan Glycosyltransferase / chemistry*
  • Peptidoglycan Glycosyltransferase / metabolism*
  • Protein Binding
  • Protein Conformation
  • Serine-Type D-Ala-D-Ala Carboxypeptidase / chemistry*
  • Serine-Type D-Ala-D-Ala Carboxypeptidase / metabolism*

Substances

  • Bacterial Outer Membrane Proteins
  • Escherichia coli Proteins
  • LpoB protein, E coli
  • Membrane Proteins
  • Penicillin-Binding Proteins
  • Peptidoglycan
  • YbgF protein, E coli
  • Peptidoglycan Glycosyltransferase
  • penicillin-binding protein 1B, E coli
  • Serine-Type D-Ala-D-Ala Carboxypeptidase