PAAP: a web server for predicting antihypertensive activity of peptides

Future Med Chem. 2018 Aug 1;10(15):1749-1767. doi: 10.4155/fmc-2017-0300. Epub 2018 Jul 24.

Abstract

Aim: Hypertension is associated with development of cardiovascular disease and has become a significant health problem worldwide. Naturally-derived antihypertensive peptides have emerged as promising alternatives to synthetic drugs.

Materials & methods: This study introduces predictor of antihypertensive activity of peptides constructed using random forest classifier as a function of various combinations of amino acid, dipeptide and pseudoamino acid composition descriptors.

Results: Classification models were assessed via independent test set that demonstrated accuracy of 84.73%. Feature importance analysis revealed the preference of proline and hydrophobic amino acids at the C-terminal as well as the preference of short peptides for robust activity.

Conclusion: Model presented herein serves as a useful tool for predicting and analysis of antihypertensive activity of peptides.

Keywords: angiotensin-converting enzyme inhibitory peptides; antihypertensive peptides; hypertension; machine learning; random forest.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antihypertensive Agents / chemistry
  • Antihypertensive Agents / therapeutic use*
  • Humans
  • Hydrophobic and Hydrophilic Interactions
  • Hypertension / drug therapy*
  • Internet*
  • Peptides / chemistry
  • Peptides / therapeutic use*
  • User-Computer Interface*

Substances

  • Antihypertensive Agents
  • Peptides