Single Step Determination of Unlabeled Compound Kinetics Using a Competition Association Binding Method Employing Time-Resolved FRET

Methods Mol Biol. 2018:1824:177-194. doi: 10.1007/978-1-4939-8630-9_10.

Abstract

The competition association binding method allows the characterization of the kinetics of unlabeled compounds and the calculation of receptor-drug affinity (K d). The K d value is defined as the ratio of the dissociation constant (or k off) of the receptor-bound ligand to its association rate constant (or k on) for a system at equilibrium. Traditionally, competition association binding experiments have been carried out using radiometric detection methods with limited assay throughput. Here we describe a novel method for the determination of unlabeled compound kinetics using the technique of time-resolved fluorescence resonance energy transfer (TR-FRET) performed at physiological temperature and sodium ion concentration. Based on a traditional screening format (10-point curves), up to 28 compounds can be tested on a single 384-well plate by this method.

Keywords: Association rate; Competition association binding kinetics; Dissociation rate; Fluorescent ligand; SNAP-tagged GPCR; Terbium cryptate; Time-resolved fluorescence resonance energy transfer.

MeSH terms

  • Animals
  • CHO Cells
  • Cations / chemistry
  • Cricetulus
  • Fluorescence Resonance Energy Transfer / methods*
  • Humans
  • Kinetics
  • Models, Chemical*
  • Sodium / chemistry

Substances

  • Cations
  • Sodium