Viroid-derived small RNA induces early flowering in tomato plants by RNA silencing

Mol Plant Pathol. 2018 Nov;19(11):2446-2458. doi: 10.1111/mpp.12721. Epub 2018 Sep 28.

Abstract

Viroid infection often leads to early flowering in the host plant. This report describes the targeting of the FRIGIDA-like protein 3 (FRL3) mRNA in tomato plants by a small RNA derived from the conserved left terminal region of the potato spindle tuber viroid (PSTVd). This targeting leads to the silencing of the FRL3 mRNA. Viroid infection assays using a severe variant of PSTVd induced early flowering in tomato plants by the down-regulation of greater amounts of the target than did a mild PSTVd variant. The targeting of the FRL3 mRNA by RNA silencing was validated by both an artificial microRNA experiment transiently expressing viroid-derived small RNAs in tomato plants, and by 5' RNA ligase-mediated rapid amplification of cDNA ends (RACE). These data unambiguously demonstrated the role of small RNAs in the early flowering seen in viroid-infected plants.

Keywords: FRIGIDA-like protein 3; PSTVd; RNA silencing; early flowering; host-pathogen interaction; vd-sRNA; viroid..

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Flowers / genetics
  • Flowers / physiology*
  • Gene Expression Regulation, Plant
  • Phenotype
  • Plant Diseases / genetics
  • Plant Diseases / virology*
  • Plant Proteins / genetics
  • Plant Proteins / metabolism
  • RNA Interference*
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • RNA, Small Interfering / metabolism*
  • RNA, Viral / metabolism*
  • Solanum lycopersicum / genetics
  • Solanum lycopersicum / physiology*
  • Solanum lycopersicum / virology*
  • Viroids / genetics*

Substances

  • Plant Proteins
  • RNA, Messenger
  • RNA, Small Interfering
  • RNA, Viral