Circulating Tumour DNA Analysis for Tumour Genome Characterisation and Monitoring Disease Burden in Extramedullary Multiple Myeloma

Int J Mol Sci. 2018 Jun 24;19(7):1858. doi: 10.3390/ijms19071858.

Abstract

Mutational characterisation in extramedullary multiple myeloma (EM-MM) patients is challenging due to inaccessible EM plasmacytomas, unsafe nature of multiple biopsies and the spatial and temporal genomic heterogeneity apparent in MM (Graphical abstract). Conventional monitoring of disease burden is through serum markers and PET-CT, however these modalities are sometimes inadequate (serum markers), not performed in a timely manner (PET-CT) and uninformative for identifying mutations driving disease progression. DNA released into the blood by tumour cells (ctDNA) contains the predominant clones derived from the multiple disease foci. Blood-derived ctDNA can, therefore, provide a holistic illustration of the major drivers of disease progression. In this report, the utility of ctDNA, as an adjunct to currently available modalities in EM-MM, is presented for a patient with EM and oligosecretory (OS) disease. Whole exome sequencing of contemporaneously acquired tumour tissue and matched ctDNA samples revealed the presence of spatial and temporal genetic heterogeneity and the identification of pathways associated with drug resistance. Longitudinal monitoring of plasma samples revealed that ctDNA can be utilised to define the dynamic clonal evolution co-existent with disease progression and as an adjunct non-invasive marker of tumour burden.

Keywords: cell-free DNA; ctDNA; digital PCR; extramedullary MM; spatial heterogeneity; whole exome sequencing.

Publication types

  • Case Reports

MeSH terms

  • Antineoplastic Combined Chemotherapy Protocols / therapeutic use*
  • Biomarkers, Tumor / blood
  • Biomarkers, Tumor / genetics*
  • Circulating Tumor DNA / blood
  • Circulating Tumor DNA / genetics*
  • Clonal Evolution
  • Disease Progression
  • Exome Sequencing
  • Female
  • GTP Phosphohydrolases / blood
  • GTP Phosphohydrolases / genetics*
  • Hematopoietic Stem Cell Transplantation
  • Humans
  • Membrane Proteins / blood
  • Membrane Proteins / genetics*
  • Middle Aged
  • Multiple Myeloma / blood
  • Multiple Myeloma / diagnostic imaging
  • Multiple Myeloma / genetics*
  • Multiple Myeloma / therapy
  • Mutation
  • Plasma Cells / metabolism
  • Plasma Cells / pathology
  • Plasmacytoma / blood
  • Plasmacytoma / diagnostic imaging
  • Plasmacytoma / genetics*
  • Plasmacytoma / therapy
  • Positron Emission Tomography Computed Tomography

Substances

  • Biomarkers, Tumor
  • Circulating Tumor DNA
  • Membrane Proteins
  • GTP Phosphohydrolases
  • NRAS protein, human

Supplementary concepts

  • Plasmacytoma anaplastic