Small- and Large-Scale High Molecular Weight Genomic DNA Extraction from Planarians

Methods Mol Biol. 2018:1774:267-275. doi: 10.1007/978-1-4939-7802-1_7.

Abstract

High-quality genomic DNA extraction is a starting point for many downstream applications in modern molecular biology. Here, we describe a simple method for isolating high molecular weight genomic DNA from planarians. The method is based on tissue lysis by a mixture of a chaotropic salt and detergent followed by organic extraction to remove proteins and lipids followed by a postpurification step to remove contaminating polysaccharides. The isolated DNA is of high molecular weight and compatible with polymerase chain reaction, cloning, or next-generation sequencing library preparation.

Keywords: CTAB; Chaotropic salt; Genomic DNA; Next-generation sequencing; Organic phase extraction; Planarian.

MeSH terms

  • Animals
  • DNA / isolation & purification*
  • Gene Library
  • Genome / genetics*
  • Genomics / methods
  • High-Throughput Nucleotide Sequencing / methods
  • Molecular Weight
  • Planarians / genetics*
  • Polymerase Chain Reaction / methods

Substances

  • DNA